Introduction
Xspecies is a method for cross-species analysis of gene expression profiles described in Kristiansson
et al. 2012 (submitted to BMC Bioinformatics).
Downloads
The method
- Implementation in R, xspecies.R, [6 KiB] (2012-06-25)
Example data
Heat stress data from eight species (
Homo sapiens,
Mus musculus,
Danio rerio,
Drosophila melanogaster,
Oryza sativa,
Arabidopsis thaliana,
Schizosaccharomyces pombe and
Saccharomyces cerevisieae). Homologene 65 is used for homolog predictions.
- Data file for Xspecies based on two-tailed moderated t-tests up- or down-regulation
HS-8sp-twotails.txt, [3323 KiB] (2012-06-25)
- Data file for Xspecies based on one-tailed moderated t-tests for up-regulation
HS-8sp-onetail-up.txt, [3316 KiB] (2012-06-25)
- Data file for Xspecies based on one-tailed moderated t-tests for down-regulation
HS-8sp-onetail-down.txt, [3318 KiB] (2012-06-25)
Supplementary material
