Index

C

classify_qnr() (in module fluff) cleanup() (in module fluff)

count_nucleotides_from_hmmsearch() (in module fluff)

D

deuniqueify_seqids() (in module fluff)

E

extend_sequences_from_hmmsearch() (in module fluff)

F

fixfasta() (in module fluff)

fluff (module)

L

limit_sequence_length() (in module fluff)

M

malign_clusters() (in module fluff)

P

parse_blastclust() (in module fluff) parse_hmmsearch_output() (in module fluff)

parse_sequence_positions_from_hmmsearch() (in module fluff)

R

retrieve_sequences_from_db() (in module fluff) retrieve_sequences_from_fasta() (in module fluff)

retrieve_sequences_from_hmmsearch() (in module fluff) run_blastclust() (in module fluff)

U

uniqueify_seqids() (in module fluff)